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Data

This page lists all data sources loaded along with the date the data was downloaded and related publication. NOTE: All external links open in a new window.

Index Organism Taxonomy Contigs No of Bases N50 N90 minContigLength GCfractionRangeVSnoOfContigs ORFs Annotation rRNAs tRNAs Arch COGS (104) Bact COGS (66)
1.1 HLRTI Archaea;;Halorhabdus tiamatea str. SARL4B 1033806;;;;;;;; Arch_Halorhabdus 72 3146564 58136 19979 8075
0.51-0.60 , 17
0.61-0.70 , 55

min:0.52 - max:0.66
3282 GenBank
GFF3
3 40 88/104 42/66
2.1 AAA833K04 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 152 246121 5159 531 200
0.21-0.30 , 14
0.31-0.40 , 30
0.41-0.50 , 100
0.51-0.60 , 7
0.61-0.70 , 1

min:0.21 - max:0.61
420 GenBank
GFF3
1 9 38/104 24/66
2.2 AAA259I14 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 631 1130152 5138 574 202
0.21-0.30 , 1
0.31-0.40 , 174
0.41-0.50 , 367
0.51-0.60 , 87
0.61-0.70 , 2

min:0.28 - max:0.61
1768 GenBank
GFF3
0 6 30/104 13/66
2.3 AAA259M10 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 573 1153369 6101 593 204
0.21-0.30 , 1
0.31-0.40 , 117
0.41-0.50 , 354
0.51-0.60 , 98
0.61-0.70 , 3

min:0.3 - max:0.66
1743 GenBank
GFF3
0 15 27/104 11/66
2.4 AAA259B11 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 605 1149777 6265 578 204
0.31-0.40 , 147
0.41-0.50 , 343
0.51-0.60 , 108
0.61-0.70 , 7

min:0.32 - max:0.64
1758 GenBank
GFF3
0 9 31/104 16/66
2.5 AAA259O05 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 667 1432262 6280 685 204
0.21-0.30 , 1
0.31-0.40 , 72
0.41-0.50 , 394
0.51-0.60 , 187
0.61-0.70 , 13

min:0.29 - max:0.66
2241 GenBank
GFF3
2 30 58/104 31/66
2.6 AAA382A03 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 450 710895 4017 501 201
0.21-0.30 , 23
0.31-0.40 , 232
0.41-0.50 , 152
0.51-0.60 , 40
0.61-0.70 , 3

min:0.21 - max:0.65
1149 GenBank
GFF3
2 6 31/104 13/66
2.7 AAA259D18 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 293 562665 6427 641 201
0.21-0.30 , 1
0.31-0.40 , 56
0.41-0.50 , 176
0.51-0.60 , 55
0.61-0.70 , 5

min:0.27 - max:0.65
859 GenBank
GFF3
1 9 24/104 5/66
2.8 AAA382M17 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 297 562944 5049 622 201
0.21-0.30 , 2
0.31-0.40 , 84
0.41-0.50 , 185
0.51-0.60 , 26

min:0.28 - max:0.60
798 GenBank
GFF3
0 6 52/104 34/66
2.9 AAA259A05 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 622 1472535 7847 718 208
0.21-0.30 , 1
0.31-0.40 , 82
0.41-0.50 , 389
0.51-0.60 , 143
0.61-0.70 , 7

min:0.29 - max:0.65
2177 GenBank
GFF3
3 22 58/104 23/66
2.10 AAA382K21 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 138 341395 7471 899 239
0.31-0.40 , 24
0.41-0.50 , 109
0.51-0.60 , 5

min:0.32 - max:0.57
456 GenBank
GFF3
2 2 13/104 7/66
2.11 AAA382C18 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 349 727552 6534 600 238
0.21-0.30 , 5
0.31-0.40 , 142
0.41-0.50 , 165
0.51-0.60 , 28
0.61-0.70 , 9

min:0.28 - max:0.63
1062 GenBank
GFF3
2 6 30/104 14/66
2.12 AAA382A20 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 514 1223213 9455 681 228
0.21-0.30 , 7
0.31-0.40 , 190
0.41-0.50 , 268
0.51-0.60 , 49

min:0.26 - max:0.60
1758 GenBank
GFF3
2 23 51/104 23/66
2.13 AAA261D19 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 452 929032 9074 600 200
0.21-0.30 , 1
0.31-0.40 , 53
0.41-0.50 , 321
0.51-0.60 , 76
0.61-0.70 , 1

min:0.29 - max:0.61
1459 GenBank
GFF3
2 20 67/104 34/66
2.14 AAA259D14 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 608 1190101 6326 589 200
0.21-0.30 , 1
0.31-0.40 , 134
0.41-0.50 , 380
0.51-0.60 , 90
0.61-0.70 , 3

min:0.3 - max:0.63
1860 GenBank
GFF3
2 13 67/104 39/66
2.15 AAA385D11 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 134 381242 9701 894 303
0.31-0.40 , 28
0.41-0.50 , 95
0.51-0.60 , 11

min:0.31 - max:0.57
535 GenBank
GFF3
2 14 11/104 3/66
2.16 AAA261G05 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 370 710317 8290 549 203
0.21-0.30 , 2
0.31-0.40 , 37
0.41-0.50 , 282
0.51-0.60 , 49

min:0.28 - max:0.6
1154 GenBank
GFF3
0 15 71/104 37/66
2.17 AAA259I07 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 449 882537 6282 594 209
0.31-0.40 , 127
0.41-0.50 , 253
0.51-0.60 , 67
0.61-0.70 , 2

min:0.31 - max:0.63
1360 GenBank
GFF3
0 9 29/104 8/66
2.18 AAA259E19 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 950 1936006 6323 632 201
0.31-0.40 , 73
0.41-0.50 , 582
0.51-0.60 , 273
0.61-0.70 , 22

min:0.32 - max:0.66
2999 GenBank
GFF3
1 29 51/104 23/66
2.19 AAA259I09 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 981 1864663 5329 614 203
0.31-0.40 , 210
0.41-0.50 , 582
0.51-0.60 , 180
0.61-0.70 , 9

min:0.31 - max:0.67
2919 GenBank
GFF3
0 39 73/104 41/66
2.20 AAA382A13 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 367 592448 4605 500 200
0.21-0.30 , 11
0.31-0.40 , 213
0.41-0.50 , 118
0.51-0.60 , 24
0.61-0.70 , 1

min:0.27 - max:0.63
987 GenBank
GFF3
2 10 33/104 13/66
2.21 AAA261O19 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 438 956260 7340 675 207
0.21-0.30 , 1
0.31-0.40 , 50
0.41-0.50 , 319
0.51-0.60 , 68

min:0.26 - max:0.6
1478 GenBank
GFF3
0 21 66/104 29/66
2.22 AAA259E22 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 438 1052577 8702 700 210
0.21-0.30 , 3
0.31-0.40 , 119
0.41-0.50 , 260
0.51-0.60 , 56

min:0.27 - max:0.59
1539 GenBank
GFF3
0 9 27/104 11/66
2.23 AAA382F02 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 172 427065 10632 713 217
0.21-0.30 , 1
0.31-0.40 , 60
0.41-0.50 , 88
0.51-0.60 , 22
0.61-0.70 , 1

min:0.30 - max:0.61
605 GenBank
GFF3
0 9 30/104 10/66
2.24 AAA261C02 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 407 827168 7437 585 207
0.21-0.30 , 3
0.31-0.40 , 31
0.41-0.50 , 327
0.51-0.60 , 45
0.61-0.70 , 1

min:0.29 - max:0.61
1324 GenBank
GFF3
0 14 70/104 33/66
2.25 AAA259E17 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 555 1182396 5876 736 201
0.21-0.30 , 1
0.31-0.40 , 54
0.41-0.50 , 355
0.51-0.60 , 139
0.61-0.70 , 6

min:0.3 - max:0.66
1835 GenBank
GFF3
2 12 34/104 13/66
2.26 AAA385M02 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 59 163345 8155 910 269
0.11-0.20 , 1
0.21-0.30 , 6
0.31-0.40 , 29
0.41-0.50 , 23

min:0.20 - max:0.49
250 GenBank
GFF3
0 0 3/104 1/66
2.27 AAA261F19 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 361 843188 7629 686 218
0.21-0.30 , 2
0.31-0.40 , 40
0.41-0.50 , 266
0.51-0.60 , 51
0.61-0.70 , 2

min:0.28 - max:0.61
1276 GenBank
GFF3
1 20 65/104 35/66
2.28 AAA261F17 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 354 717218 7705 597 206
0.21-0.30 , 1
0.31-0.40 , 31
0.41-0.50 , 250
0.51-0.60 , 71
0.61-0.70 , 1

min:0.29 - max:0.61
1129 GenBank
GFF3
0 12 64/104 35/66
2.29 AAA385M11 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 300 427991 3303 454 212
0.21-0.30 , 6
0.31-0.40 , 54
0.41-0.50 , 150
0.51-0.60 , 84
0.61-0.70 , 6

min:0.26 - max:0.68
719 GenBank
GFF3
0 0 1/104 2/66
2.30 AAA259J03 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 657 1223028 4648 579 201
0.21-0.30 , 2
0.31-0.40 , 120
0.41-0.50 , 418
0.51-0.60 , 110
0.61-0.70 , 7

min:0.3 - max:0.64
1902 GenBank
GFF3
0 11 47/104 19/66
2.31 AAA833F18 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 105 322254 14279 1090 219
0.21-0.30 , 3
0.31-0.40 , 15
0.41-0.50 , 80
0.51-0.60 , 6
0.61-0.70 , 1

min:0.25 - max:0.61
429 GenBank
GFF3
0 5 22/104 4/66
2.32 AAA382N08 Archaea~~Archaea; Euryarchaeota;Uncultured candindate division MSBL1~~~~~~~~ Arch_MSBL1 305 610552 7151 603 200
0.21-0.30 , 6
0.31-0.40 , 175
0.41-0.50 , 117
0.51-0.60 , 7

min:0.25 - max:0.60
924 GenBank
GFF3
3 9 29/104 19/66
3.1 AAA799N04 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-N04~~~~~~~~ Arch_Nitrosopumilus 119 1296717 33733 6989 307
0.21-0.30 , 3
0.31-0.40 , 115
0.41-0.50 , 1

min:0.30 - max:0.41
1771 GenBank
GFF3
2 30 94/104 44/66
3.2 AAA799D11 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-D11~~~~~~~~ Arch_Nitrosopumilus 77 1360636 72266 13941 317
0.21-0.30 , 4
0.31-0.40 , 68
0.41-0.50 , 5

min:0.26 - max:0.45
1737 GenBank
GFF3
2 37 88/104 31/66
3.3 AAA799E16 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-E16~~~~~~~~ Arch_Nitrosopumilus 168 1415623 42554 4820 209
0.21-0.30 , 11
0.31-0.40 , 154
0.41-0.50 , 2
0.51-0.60 , 1

min:0.24 - max:0.53
1919 GenBank
GFF3
1 34 95/104 41/66
3.4 AAA799D07 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-D07~~~~~~~~ Arch_Nitrosopumilus 33 435918 64295 4965 1001
0.31-0.40 , 33

min:0.31 - max:0.38
562 GenBank
GFF3
2 16 56/104 30/66
3.5 AAA799O18 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-O18~~~~~~~~ Arch_Nitrosopumilus 50 522768 20264 5502 1020
0.21-0.30 , 1
0.31-0.40 , 48
0.41-0.50 , 1

min:0.28 - max:0.47
697 GenBank
GFF3
0 17 63/104 33/66
3.6 AAA799B03 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-B03~~~~~~~~ Arch_Nitrosopumilus 101 1003945 29716 4527 301
0.21-0.30 , 5
0.31-0.40 , 95
0.41-0.50 , 1

min:0.26 - max:0.46
1349 GenBank
GFF3
1 24 75/104 37/66
3.7 AAA799P11 Archaea~~Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I; SCGC AAA799-P11~~~~~~~~ Arch_Nitrosopumilus 111 1081049 43146 7452 210
0.21-0.30 , 8
0.31-0.40 , 103

min:0.28 - max:0.40
1438 GenBank
GFF3
2 17 64/104 24/66
4.1 RS24 Bacteria;;Alphaproteobacteria ;Cultured;;;;;;; Bact_Alphaproteobacteria 5 1957724 736154 170269 25260
0.31-0.40 , 1
0.41-0.50 , 4

min:0.34 - max:0.46
1909 GenBank
GFF3
3 39 56/104 66/66
5.1 HLPCO Bacteria;;Haloplasma contractile SSD-17B 1033810;;;;;;;; Bact_Haloplasma 34 3404505 347868 48356 761
0.21-0.30 , 7
0.31-0.40 , 26
0.41-0.50 , 1

min:0.24 - max:0.49
3036 GenBank
GFF3
4 27 63/104 66/66
6.1 NspC22 Bacteria~~Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina; Nitrospina sp. SCGC AAA799-C22~~~~~~~~ Bact_Nitrospina 88 1678166 36073 9266 2042
0.31-0.40 , 1
0.41-0.50 , 43
0.51-0.60 , 44

min:0.39 - max:0.56
1639 GenBank
GFF3
3 18 21/104 18/66
6.2 NspA02 Bacteria~~Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina; Nitrospina sp. SCGC AAA799-A02~~~~~~~~ Bact_Nitrospina 97 1404272 20330 7058 1978
0.31-0.40 , 3
0.41-0.50 , 58
0.51-0.60 , 36

min:0.37 - max:0.55
1379 GenBank
GFF3
3 24 14/104 17/66
7.1 SSPSH Bacteria;;Salinisphaera shabanensis E1L3A 1033802;Red Sea Shaban deep;;23;1313;23;1999;454/illum;; Bact_Salinisphaera 41 3760335 129079 43131 13234
0.51-0.60 , 3
0.61-0.70 , 38

min:0.56 - max:0.63
3524 GenBank
GFF3
3 46 61/104 66/66