An INtegrated Data warehouse of mIcrobial GenOmes (INDIGO)
Show the proteins for a particular gene.
Show all the pathways assigned to genes from a particular organism.
shows all proteins in an organism
Show all genes from a particular organism.
Retreives Prosite / GO based lists
shows all protein domains from an organism
Shows assigned Gene Ontologies from an Organism
INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles. Alam I, Antunes A, Kamau AA, Ba Alawi W, Kalkatawi M, Stingl U, Bajic VB. PLoS One. 2013 Dec 6;8(12):e82210.
INDIGO is being actively developed at Computational Biosciences Research Center (CBRC) in collaboration with Red Sea Research Center at KAUST. INDIGO is powered by InterMine Framework.
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