Hepatitis C Virus Protein Interaction Database
Home Search Manual FAQ Statistics Links Download Contact

Interaction details
Details Molecule A
Details Molecule B
Interaction details

Human protein Information
Gene Name VIM
EntrezGene 7431
HPRD ID 01899
Category protein-coding
Description Vimentin
Aliases FLJ36605, OTTHUMP00000019224
Previous Symbols 
Previous Names 
Chromosome 10
Entrez Gene Cyto Band 10p13
Strand Plus
Gene start 17311250
Gene end 17319598
Gene size 8348
RefseqRNA NM_003380.2
RefSeq Peptide NP_003371.2
Ensembl Gene ENSG00000026025
UniGene Hs.628678
GenBank Accession AK093924, AK056766, BC066956, CR595804, CR595631, CR615569, CR593764, CR618852, CR601844, CR605908, CR620637, CR617845, CR624853, CR593122, CR602711, AF328728, CR604958, CR608479, CR610054, CR604633, CR617011, BC000163, CR614482, CR621379, CR596714, Z19554, NM_003380, CR596422
EMBL AF328728, AK056766, AK093924, AK097336, AK222482, AK222507, AK222602, AL133415, BC000163, BC030573, BC066956, CR407690, M14144, M18888, M18889, M18890, M18891, M18892, M18893, M18894, M18895, M25246, X16478, X56134, Z19554
OMIM 193060
Function Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells.
SwissProt (name) VIME_HUMAN
SwissProt (acc) P08670
PDB 1GK4, 1GK6, 1GK7
IPI IPI00418471
Ensembl Protein ID ENSP00000224237
PharmGKB PA37311
Interpro IPR016044, IPR001664, IPR006821, IPR018039
Pfam PF00038, PF04732
HCCNet Link http://www.megabionet.org/hcc/detail.php?symbol=VIM
EHCO Dataset PubMed, mRNA, Protein
EHCO UP regulated 3
EHCO Down regulated 0
Oncodb.hcc link http://oncodb.hcc.ibms.sinica.edu.tw/hcc/display_by_gene.cgi?stable_id=ENSG00000026025&cut_off=1&option=simple
KEGG 
Reactome Pathway ID 166016, 166054, 166058, 168138, 168142, 168176, 168179, 168181, 168188, 168249, 168256, 168898, 181438
Nature Pathway 
Nature Pathway ID 
NCI Nature curated pathways links 
HPD link  
Netpath ID NetPath_14
Gene transcriptionally regulated by Netpath Pathway IL-2 Signaling Pathway
Netpath Description Interleukin-2 belongs to a family of cytokines, which includes IL-4, IL-7, IL-9, IL-15 and IL-21. IL-2 signals through a receptor complex consisting of IL-2 specific IL-2 receptor alpha (CD25), IL-2 receptor beta (CD122) and a common gamma chain (?c), which is shared by all members of this family of cytokines. Binding of IL-2 activates the Ras/MAPK, JAK/Stat and PI 3-kinase/Akt signaling modules.
Netpath Links http://www.netpath.org/pathways?path_id=NetPath_14
Gene Ontology GO:0005198, GO:0005200, GO:0005515, GO:0005737, GO:0005856, GO:0005882, GO:0006928, GO:0045103
 
© 2010-2020 All rights reserved. King Abdullah University of Science and Technology, All rights reserved